Recent Developments and Applications of the MMPBSA Method

نویسندگان

  • Changhao Wang
  • D'Artagnan Greene
  • Li Xiao
  • Ruxi Qi
  • Ray Luo
چکیده

The Molecular Mechanics Poisson-Boltzmann Surface Area (MMPBSA) approach has been widely applied as an efficient and reliable free energy simulation method to model molecular recognition, such as for protein-ligand binding interactions. In this review, we focus on recent developments and applications of the MMPBSA method. The methodology review covers solvation terms, the entropy term, extensions to membrane proteins and high-speed screening, and new automation toolkits. Recent applications in various important biomedical and chemical fields are also reviewed. We conclude with a few future directions aimed at making MMPBSA a more robust and efficient method.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Browse searchable encryption schemes: Classification, methods and recent developments

With the advent of cloud computing, data owners tend to submit their data to cloud servers and allow users to access data when needed. However, outsourcing sensitive data will lead to privacy issues. Encrypting data before outsourcing solves privacy issues, but in this case, we will lose the ability to search the data. Searchable encryption (SE) schemes have been proposed to achieve this featur...

متن کامل

An Overview of Technological Developments in Medical Applications of X-Rays and Radioactivity

The years 1895 to 1898 were momentous for their impact on health and human well beings. First, Wilhelm Roentgen noted a glowing fluorescent screen, caused by invisible rays. This event subsequently led to the discovery of X-rays in 1895, and thus the birth of the “atomic age”. Next Becquerel’s investigations of these mysterious rays led to his experiments with uranium salt crystals. He th...

متن کامل

Recent developments in configuration design and optimization of mineral separation circuits; A Review

The present research reviews two basic approaches for the separation circuit configuration analysis. The first approach is to optimize the circuit configuration. In this method, after a circuit modeling, a variety of search algorithms and mathematical optimization methods are used. Previous works show that this approach has more application in the flotation process. The second approach called t...

متن کامل

Colloids: Applications and Remaining Challenges

Using of colloids and polymeric microparticles are gradually increasing. It is observed that the positive effects of particles stems in both traditional applications such as column pickings, coatings and paints to more recent technologies in diagnostics, drug delivery and optical devices are well documented. This review focuses on importance of colloids and covers their applications on three le...

متن کامل

Colloids: Applications and Remaining Challenges

Using of colloids and polymeric microparticles are gradually increasing. It is observed that the positive effects of particles stems in both traditional applications such as column pickings, coatings and paints to more recent technologies in diagnostics, drug delivery and optical devices are well documented. This review focuses on importance of colloids and covers their applications on three le...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره 4  شماره 

صفحات  -

تاریخ انتشار 2017